A Star Wars: The Clone Wars comic by YogurthFrost (http://sh.st/gdCNg) Definitely take a peek at his gallery when you get a chance, and donate if you are able, since he pays for the scans out-of-pocket and a few donations would probably speed up release times on his comics.
Updated: 3-16-16

I actually like that story quite a bit. But still, so many words!

Edit: Damn, this shit is all over the place.

Base +9, I Am Geese +6, sarofa +15, falinx +9, Incest1234 +7, observer1980 +23, omgpirate +13, jaylou1010 +9, Furfan212 +3, Smothtiger_fm +8, danixxx +31, dsax +27, Boya +7, and 12 more...

This is amazing. I hope there is a follow up to this? Like what happens after the Clone Wars?

Base +9, sarofa +15, Incest1234 +7, Project_Demise +11, omgpirate +13, jaylou1010 +9, observer1980 +23, Furfan212 +3, Smothtiger_fm +8, danixxx +31, dsax +27, hunter250 +5, loyal viewer +7, and 23 more...

This is how it should have happened.

Base +7, Project_Demise +11, omgpirate +13, jaylou1010 +9, observer1980 +23, Furfan212 +3, Smothtiger_fm +8, danixxx +31, mojomunkeez +15, dsax +27, Boya +7, hunter250 +5, DKblitz +6, and 44 more...

I like it, great fanfic.

Base +1, Project_Demise +11, omgpirate +13, jaylou1010 +9, observer1980 +23, Furfan212 +3, Smothtiger_fm +8, danixxx +31, dsax +27, hunter250 +5, Greelox +9, loyal viewer +7, furfan986 +1, and 17 more...

It's well done, but the artist behind this has some very severe issues with perspectives and maintaining character dimensions. Not to mention skipping plot events.

Base +6, Moku +9, Furfan212 -3, Smothtiger_fm +8, jaylou1010 +9, Boya +7, hunter250 +5, furfan986 -1, daisblackwing +14, Learvok +9, Rei-Tenshi +38, Incest1234 +8, Murderbot -7, and 5 more...

This was great. I admit I didn't read everything I just wanted to see if it had an actual ending. This seems like it's still not ready.

Base +7, Furfan212 +3, Smothtiger_fm +8, jaylou1010 +9, Boya +7, furfan986 +1, daisblackwing +14, Learvok +9, 150 +5, Murderbot -7, jfragrettel +7

WoW, I can't believe, but, this actually is a pretty amazing work, thanks ;D
Thanks a lot for the first update of 2013 ;D

Base +8, jaylou1010 +9, Greelox +9, furfan986 +1, daisblackwing +14, Learvok +9, Rei-Tenshi +38, Murderbot -7, Grunt Arbiter +7, zzl4100598 +19, Incest1234 +8, 58569 +7, jfragrettel +7

Not enough fucking.

Base +4, mojomunkeez -15, TylerWolf -6, Boya -7, loyal viewer -7, Murderbot +7, hermit20 +6, magico alverman -7, Tofu delivery -7, animanera89 +7, Giovannimx -6, vishnu079 -5, Hyp0 +14, and 2 more...

Absolutely love it. The style of drawing is so flexible. Really appealing to most people who read it I bet!! Awesome FanFic.

Base +1, Greelox +9, loyal viewer +7, furfan986 +1, daisblackwing +14, Learvok +9, Humbard +10, Rei-Tenshi +38, Incest1234 +8, Murderbot -7, Dragonchan +7, zzl4100598 +19, jfragrettel +7

Now see, i much rather prefer an ending such as this compared to what Lucas pulled put of his ass. Bravo, good sir, bravo.

Base +5, loyal viewer +7, furfan986 +1, daisblackwing +14, Humbard +10, Rei-Tenshi +38, mojomunkeez +14, falloutghoul -10, Murderbot -7, Rylon321 +7, Incest1234 +6, Grunt Arbiter +7, Dwave4567 +5, and 9 more...

Came for the porn, stayed for the story.

Base +7, Kanuro5 +8, Humbard +10, 150 +5, nww +7, Vulcanlsj +9, falloutghoul +10, hermit20 +6, Murderbot -7, Airnutz +7, HonorableOne11 +7, Dragonchan +7, Rylon321 +7, and 16 more...

I am usually not into fanfiction, but man, this one is actually very good, as Rensune said, i came for the porn, but stayed for the story.
Saying that, I still hope that we see more hot action between Anakin and Ahsoka, throw some action betweenObi Wan and Asajj Ventress for good meassure too :3

BTW she looks beautiful while pregnant <3

Base +18, 150 +5, nww +7, Murderbot -7, ThirdEye +6, Adrain Shepard +7, neostar1 +6, Spyderslicer +7, Junm +7, bassfu -6, jfragrettel +7, HabaneroJim +12

Better than the actual starwars plot lol

Base +9, Murderbot -7, loyal viewer +6, interpid +5, anonymous622 +5, ThirdEye +6, neostar1 +6, 6ilber +6, ezkel +7, the phantom limb -7, Spyderslicer +7, vishnu079 +5, bassfu -6, and 2 more...

Well, this isn't bad and is quite interesting, but... it's confusing, at the times. Feels like it's jumping from one point to another. Such as Ashoka not knowing Anakin is now Vader espite talking to him and switch between narrators.

Base +5, stabbybelkar +7, the phantom limb +6, Finbastard +5, Junm -7, jfragrettel +7

Genial ^^ Existe t il une version traduite en français ?

Base +4, PrinceKoopaIV -4

can't wait for more of this story eps 1-3 wer a let down to me this is better

Base +10, the phantom limb -7, bassfu -6, Kiranta -6

MOor please

Base +6

Una muy buena Parodia de "Star Wars: The Clone Wars" mis camaradas. Gracias.

Base +6

This reality is the best. No choosing which color is shining brighter. Just Neutrality. I love this universe's story line.

Base +5, ThirdEye +6, dariun24 +7, bassfu -6, jfragrettel +7

Too much text. Far, far too much text.

Then again, I like the prequel trilogy, so most of you will probably downvote this.

Base +6, KD73 +1, ThunderKurono +6, Murderbot +10, bassfu +6, jfragrettel +7

I want this to be complete, already... With about a million pages. It's great!

Base +6, carnor_jax007 +1, bassfu -6

Is the little guy in the robot suit a real star wars alien or just made up for this?

Base +6

it updates slowly but is worth the wait (hoping it up dates alittle faster thow)

Base +7, zashisouthpaw +4, jfragrettel +7

Came for the sex. Stayed for the story.

Base +8, ThunderKurono +6, teohoch +6, zashisouthpaw +4, ColaPopKun +5, BenWhite9311 +6, jfragrettel +7

Realmente es un muy buen trabajo y espero que no sea el Final. Gracias.

Base +6, DKblitz +6, zashisouthpaw +4, jfragrettel +7

R-ROOAW WOO ROO?

Base +8, ColaPopKun +5, jfragrettel +7

awwww, you skipped the blooper page!

Base +3

Man this is one good comic. Hope he will make a lot more updates for this story.

Base +7, the phantom limb -7

Going Against Destiny: A better love story than Episode I, II, and III.

Base +8, the phantom limb -7, Kiranta -6

This is a twelve years old kid's fantasy. It's ilogic, melodramatic, non-sense and fool. But the draw style is quite good and it keeps some romantic continuity. Not bad for a fanfic. But only really good for "freak" children XD

Base +7, KingSinzeo -7, animanera89 +7, the phantom limb +7, Spyderslicer -7, bassfu +6, jfragrettel +7

glad this is still ongoing can't wait for more

Base +10, jfragrettel +7

I always thought the concept of turning to the dark side in the SWU was kinda bullshit. What, you can't hate something and still be a good guy? Seems kinda contrived.

Base +6, the phantom limb -7

Can't wait for more pages

Base +6

@PregnantWhoreFucker: Hating something isn't the problem. The Jedi actually hate the sith. No, the problem is keeping your emotions under control and not letting them control you. If you were to act on your hate, you would undoubtedly do something horrible. You might feel as if nothing had changed within you and so it becomes easy to rationalize that something of this level isn't as bad as people say. So you tell yourself that it's alright to do things like that. THAT is the trap. The more acts you do with this train of thought, the less likely you'll see anything wrong with them and the more likely you'll do something worse. It's a slippery slope and all it takes is a little push. This is exacerbated by the fact that you can literally fuel you power with your hatred and even the fear and hatred of your enemies can give you strength. Not to mention that the reason you turned to the Dark Side is not always the reason that you stay. You know what they say about power and corruption. Anyhoo, I've rambled enough. If you'd like a better understanding of the Dark Side, I would suggest reading the Darth Bane trilogy by Drew Karpyshyn. Great books that illustrate the workings of the Dark Side of the Force from the perspective of the one who established the Rule of Two. Kyp Durron is another character I recommend reading about to understand how slippery of a slope it is and the long and difficult journey to redemption.

Base +5, Goofy1 +6, jfragrettel +7, Project_Demise +11

Love the story... but it is SO DAMN CONFUSING :P

Base +6

Honestly, I don't mind waiting like weeks or months if that's what it takes to get one page out, each page so far has been worth gold mines in this continuity.

Base +7

i was wondering how dooku would react to these events. can't wait to see h ow things progress.

Base +10, jfragrettel +7

good alternative history)

Base +1

I just look over the comic and every time I see that it's been updated it looks the same. What's changing?

Base +1

Like i said before, great story.
I like this new continuity.

BUT, we need more sexy time between Ahsoka and Anakin

Base +12, Project_Demise +11